Tardigrades

UNC-Chapel Hill Researchers Discover New Clues To How Tardigrades Can Survive Intense Radiation

By Keith Cowing
Press Release
University of North Carolina at Chapel Hill
April 16, 2024
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UNC-Chapel Hill Researchers Discover New Clues To How Tardigrades Can Survive Intense Radiation
Tardigrades dramatically increase expression of certain DNA repair transcripts in response to ionizing radiation. (A) Volcano plot of Log2FC by -Log10(FDR) showing the transcriptional response of H. exemplaris to 500 Gy IR. The top 15 most significantly enriched 5 transcripts (by FDR) are marked in gray. DNA repair pathway genes among the top 15 are labeled. (B-D) MA plots displaying Log2FC of H. exemplaris transcripts in response to 500 Gy IR with (B) transcripts encoding BER proteins marked in orange, (C) transcripts encoding NHEJ proteins marked in light blue, and (D) transcripts encoding NER, MMR, HR, and TMEJ proteins marked in yellow, pink, green, and dark blue, respectively. Transcripts encoding DNA repair 10 proteins that are significantly enriched are indicated by name. Note that LIG1 functions in two pathways. — biorxiv.org

University of North Carolina at Chapel Hill researchers have discovered that tardigrades – microscopic animals famed for surviving harsh extremes – have an unusual response to radiation.

Led by UNC-Chapel Hill researcher Bob Goldstein’s lab, the new research paper published on April 12 in Current Biology reveals new details on tardigrades’ responses to radiation. Radiation has long been known to damage DNA, and in humans, DNA damage from excessive radiation exposure can lead to diseases. But the tardigrades have an unexpected way to correct the damage.

“What we saw surprised us,” said Goldstein. “The tardigrades are doing something we hadn’t expected.”

Goldstein’s lab has developed lab methods for studying tardigrades for the past 25 years. The lab has identified several tricks that tardigrades have for surviving conditions that would be life-threatening for humans and most animals.

Sixty years ago, researchers discovered that tardigrades could survive about 1000 times more intense radiation than humans are known to survive. Courtney Clark-Hachtel, a former postdoctoral scholar in the lab joined the group to examine how tardigrades can survive intense radiation. She found that a species of tardigrade is not immune to DNA damage – irradiation does damage their DNA – but the tardigrades can repair extensive damage.

Clark-Hachtel and Goldstein were surprised to find that tardigrades can increase the volume of production from DNA repair genes. Unlike humans, tardigrades can ramp up the level of DNA repair genes’ products to such an extreme extent that they become some of the most abundant gene products in animals.

“These animals are mounting an incredible response to radiation, and that seems to be a secret to their extreme survival abilities,” said Clark-Hachtel. “What we are learning about how tardigrades overcome radiation stress can lead to new ideas about how we might try to protect other animals and microorganisms from damaging radiation.”

As the UNC-Chapel Hill scientists completed the work, researchers in France found similar results in independent experiments. Museum of Natural History Paris researchers Jean-Paul Concordet and Anne de Cian and their coworkers also found a new tardigrade protein that could protect DNA. Their results are reported in the journal eLife.

“We were thrilled to see that each lab’s results could independently confirm each other,” Goldstein adds.

S3. in situ hybridization for DNA repair transcripts reveals transcript accumulation in many tissues with some tissue-specific enrichment. (A-I) Tissue-specific enrichment profiles for DNA repair transcripts with and without exposure to 100 Gy IR. Tissue abbreviations are as 5 follows: HN/B (Head Neuron/Brain), SM (Stylet Muscle), SNS (Stomodeal Nervous System associated with stylet), SG (Salivary Gland), TG1 (Trunk Ganglion segment 1), TG2-4 (Trunk Ganglion segments 2-4), CG (Claw Gland), SC (Storage Cells, free-floating throughout the body cavity), BM (Body Muscle), O (Ovary), M (Midgut), H (Hindgut), MT (Malpighian Tubules), C (Cloaca), and E (Epidermis). Tissues were scored from 0 (no observed expression) to 3 (high 5 expression) (see Materials and Methods for details on expression scoring). Tissue identification based on morphological analysis and informed by (33). Transcripts encoding members of the BER, TMEJ, NHEJ, and HR pathways are all represented. (J) Schematic of a lateral view of an adult tardigrade with landmark structures indicated (adapted from (44)). — biorxiv.org

Tissue-specific enrichment of tardigrade DNA repair transcripts following ionizing radiation exposure. (A-D) Representative images of in situ hybridization for DNA repair transcripts with and without exposure to 100 Gy ionizing radiation. Exposure and contrast were 5 adjusted to visualize regions of most intense signal. Expression in salivary glands (arrows), claw glands (arrowheads), and hindgut (dashed outlines) is indicated where seen. Transcripts encoding members of the (A) TMEJ, (A-B) BER, (C) NHEJ, and (D) HR pathways are represented. Scale bar in A applies to all images. Anterior is to the left. (E) Schematic of a lateral view of an adult tardigrade with salivary glands (burgundy), claw glands (green), hindgut (orange), and other 10 landmark structures (gray) indicated (adapted from (44)). — biorxiv.org

The tardigrade Hypsibius exemplaris dramatically upregulates DNA repair pathway genes in response to ionizing radiation, Current Biology

Tardigrades dramatically upregulate DNA repair pathway genes in response to ionizing radiation (preprint)

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