Biosignatures & Paleobiology

Deep Microbial Colonization in 2-Billion-Year-Old Ultramafic Rock from the Bushveld Complex

By Keith Cowing
Status Report
biorxiv.org
April 16, 2026
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Deep Microbial Colonization in 2-Billion-Year-Old Ultramafic Rock from the Bushveld Complex
Rock description, contamination discrimination, and in situ microbial detection. a, b, Core sample under visible (a) and UV light (b), showing a crack (red arrowhead) made with a sterile hammer. Blue fluorescence indicates contamination on the edge. c, Broken surface under UV light showing contamination where blue fluorescence is visible only at the core edge (red arrowhead). d, Thin section (crossed polarizers) displaying orthopyroxene (opx), clinopyroxene (cpx), phlogopite (phl), and quartz. e, Prepared rock section with analytical points (yellow arrows). f–h, Fluorescence microscopy (SYBR Green I) of green regions, with analytical spots marked. i, O-PTIR spectra of the rock (colored squares) compared to control microorganisms (E. coli, N. aerobiophila, and M. sedula). — biorxiv.org

Archean cratons may provide stable microbial habitats in the deep subsurface, as evidenced by the discovery of billion-year-old crustal fluids.

However, the long-term habitability of these cratonic environments is uncertain, as polymetamorphic evolution in most cratons typically destroys microbial habitats through mineral reactions and porosity loss.

Preservation of deep microbial habitats is more likely where mantle-derived magma intruded the craton after metamorphic overprinting. Here we report the discovery of dense microbial colonization at 814 m depth within the 2.05-billion-year-old, unmetamorphosed Bushveld Igneous Complex intrusion, South Africa.

Using advanced contamination-control protocols and synchrotron-based X-ray spectroscopy, we identified indigenous microbial cells localized at the rims of phlogopite, a hydrous phyllosilicate mineral. Our study reveals that microbial colonization is associated with Fe(III) derived from the structure of phlogopite, where the dehydrogenation likely oxidizes Fe(II) to Fe(III) coupled to H2 generation.

Despite the absence of fracture-driven fluid ingress in the unfractured rock matrix, aqueous alteration evidenced at the rims by potassium removal indicates a self-sustaining habitat driven by an internal redox gradient.

These findings demonstrate that aqueous alteration of ultramafic rocks can sustain isolated microbial life over geological timescales, significantly expanding the potential for long-term habitability on both Earth and Mars.

Deep Microbial Colonization in 2-Billion-Year-Old Ultramafic Rock from the Bushveld Complex, biorxiv.org

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